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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797047.1_cds_XP_016453054.1_4680
CDS Infomation

[gene=LOC107777511] [db_xref=GeneID:107777511] [protein=omega-3 fatty acid desaturase, endoplasmic reticulum-like] [protein_id=XP_016453054.1] [location=complement(join(6341..6532,6653..6790,6899..6979,7188..7373,7478..7570,7682..7748,8119..8208,8292..8578))] [gbkey=CDS]
Sequence

ATGGGGTCTCTTGGATTGAATTCTGAAAAGGGAAATGAAGAAATGGAATTGGAATTTGAT
CCAAGTGCACCACCTCCATTTAAATTATCTGAAATTCGAGCTGCTATTCCTAAGCATTGT
TGGGTTAAAAATCCATGGAAATCTCTAAGTTATGTTCTTAGAGATTTTATTATTGTTGTT
GCATTGGTAGCCATAGCCATTTATTTGGATAGTTGGAAATTTTGGCCACTTTATTGGGTT
GTTCAAGGTACTATGTTTTGGGCAATCTTTGTTCTTGGACATGACTGTGGACATGGAAGC
TTTTCAGATAGTGCATTTTTGAATAGTGTGGTTGGACACATTCTTCATTCTTCTATCCTT
GTTCCCTATCATGGATGGAGATTCAGCCATAAAACTCACCATCAAAACCATGGAAATGTC
GAAGCTGATGAATCTTGGGTGCCTATGCCAGAGAAGCTATATAAAGAACTGGATTTTGCT
ACCAAATTTTTTAGATTCAAGATTCCTTTGCCCTTATTAGCATACCCAATGTACTTGATA
AGCAGAAGTCCAGGGAAAAAAGGTTCTCATTTTAATCCATACAGTGATTTGTTTCAACCT
CATGAGAGAAAATATGTCATAACATCAACATTATGCTGGACTATTATTGTTGCTTTCCTC
TATTATCTTTATACTGTCGTTGGCTCTCTCCAACTGCTTAAGCTTTATGGAATTCCTTAT
ATGATTTTTGTGATGTGGTTGGATTTTGTCACTTATTTACACCACCATGGCCATGAGCAG
AAGTTACCTTGGTATCGTGGCAAGGAGTGGAGTTATCTTAGAGGAGGATTAACAACAATT
GATCGTGATTATGGTTTGTTTAATAACATTCACCATGATATTGGCACCCATGTCATTCAC
CATCTTTTTCCTCAGATACCACATTATCATCTCGTCGAAGCGACTAAAGCGGCGAAGCCG
GTACTTGGGAAATATTACAGAGAGCCCAAAAAATCAGGAATAATTCCATTTCATTTGATT
GGAAATTTAGTGAGAAGTATGATGAAGGACCATTTTGTTAGTGACAATGGAGAAATTGTG
TATTATCAGACTGATCCACAACTGCTCAAATTATTTGGGAAAAAGGCTGAGTGA

Peptide Sequence

PEP ID

XP_016453054.1
PEP Infomation

PREDICTED: omega-3 fatty acid desaturase, endoplasmic reticulum-like [Nicotiana tabacum]
Sequence

MGSLGLNSEKGNEEMELEFDPSAPPPFKLSEIRAAIPKHCWVKNPWKSLSYVLRDFIIVV
ALVAIAIYLDSWKFWPLYWVVQGTMFWAIFVLGHDCGHGSFSDSAFLNSVVGHILHSSIL
VPYHGWRFSHKTHHQNHGNVEADESWVPMPEKLYKELDFATKFFRFKIPLPLLAYPMYLI
SRSPGKKGSHFNPYSDLFQPHERKYVITSTLCWTIIVAFLYYLYTVVGSLQLLKLYGIPY
MIFVMWLDFVTYLHHHGHEQKLPWYRGKEWSYLRGGLTTIDRDYGLFNNIHHDIGTHVIH
HLFPQIPHYHLVEATKAAKPVLGKYYREPKKSGIIPFHLIGNLVRSMMKDHFVSDNGEIV
YYQTDPQLLKLFGKKAE

Transcript Sequence

Gene sequence data has not been registered.